TCPA - Cell Lines
Quick Tutorial

Feb. 1, 2017

Outline

• Key Features
• External Data Resources
• Modules (video tutorial)

Key Features

• The current data release contains >650 cell lines of 19 lineages.
• The current app contains both analysis and visualization modules.

External Data Resources

• The Cancer Genome Atlas (TCGA)
• Cancer Cell Line Encyclopedia (CCLE)
• Catalogue of Somatic Mutations in Cancer (COSMIC)
• Genomics of Drug Sensitivity in Cancer (GDSC)
• Cancer Therapeutics Response Portal (CTRP)
• Cancer Target Discovery And Development (CTD²)
• NIH Library of Integrated Network-Based Cellular Signatures (LINCS)

Modules

• Datasets
  • Summary
  • Download
  • My Protein
• Analysis
  • Protein Protein Correlation
  • Protein Mutation Correlation
  • Protein Drug Correlation
• Visualization
  • Network
  • Heatmap

Summary

Download

My Protein

Protein Protein Correlation Analysis

Protein Mutation Correlation Analysis

Protein Drug Correlation Analysis

Network Visualization

Heatmap Visualization